1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.011G051500

Potri.011G051500


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.011G051500
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
402120 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
402187 No alias protein kinase family protein 0.03 Orthogroups_2024-Update
420704 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
At1g80270 No alias PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6] 0.04 Orthogroups_2024-Update
Brara.F01064.1 No alias RNA editing factor *(POCO) 0.04 Orthogroups_2024-Update
GRMZM2G005980 No alias PENTATRICOPEPTIDE REPEAT 596 0.02 Orthogroups_2024-Update
GRMZM2G160994 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G119200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G120330.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G083900.1 No alias RNA editing factor *(POCO) 0.04 Orthogroups_2024-Update
Seita.4G018800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G144000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G018900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g079320 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Solyc06g005140 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen07g031410 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 164 209
IPR002885 Pentatricopeptide_repeat 345 371
IPR002885 Pentatricopeptide_repeat 132 161
No external refs found!