1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.011G156800

Potri.011G156800


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.011G156800
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
94907 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
98955 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
A4A49_00959 No alias pentatricopeptide repeat-containing protein 0.05 Orthogroups_2024-Update
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
A4A49_38131 No alias pentatricopeptide repeat-containing protein 0.05 Orthogroups_2024-Update
At3g49170 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Orthogroups_2024-Update
At5g03800 No alias Glycosyltransferase (Fragment)... 0.03 Orthogroups_2024-Update
GRMZM2G077420 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G481373 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G203500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G085150.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G085920.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU5Hr1G066140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g58100 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g25280 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
MA_20168g0010 No alias (at3g26782 : 533.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_68084g0010 No alias (at1g11290 : 535.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00001463-RA No alias (at4g33170 : 587.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00002641-RA No alias (at1g11290 : 548.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00011140-RA No alias (at1g11290 : 575.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00032333-RA No alias (at4g18750 : 689.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00034005-RA No alias (at3g23330 : 585.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00038145-RA No alias (at5g52630 : 598.0) Encodes a member of the DYW... 0.02 Orthogroups_2024-Update
PSME_00039410-RA No alias (at2g13600 : 502.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00048766-RA No alias (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... 0.01 Orthogroups_2024-Update
PSME_00056121-RA No alias (at4g13650 : 672.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056680-RA No alias (at2g22070 : 511.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Seita.9G548100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 613 660
IPR002885 Pentatricopeptide_repeat 311 358
IPR002885 Pentatricopeptide_repeat 210 257
IPR002885 Pentatricopeptide_repeat 512 560
IPR002885 Pentatricopeptide_repeat 689 712
IPR002885 Pentatricopeptide_repeat 285 309
IPR002885 Pentatricopeptide_repeat 113 141
IPR002885 Pentatricopeptide_repeat 407 459
No external refs found!