Potri.011G157900

Description : FAD-binding Berberine family protein

Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.011G157900
Cluster	HCCA clusters: cluster_0140

Target	Alias	Description	ECC score	Gene Family Method
At1g11770	No alias	Berberine bridge enzyme-like 2...	0.03	Orthogroups_2024-Update
At1g26380	No alias	Berberine bridge enzyme-like 3...	0.03	Orthogroups_2024-Update
At1g30740	No alias	FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30740]	0.02	Orthogroups_2024-Update
At5g44360	No alias	FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44360]	0.03	Orthogroups_2024-Update
Bradi1g38250	No alias	FAD-binding Berberine family protein	0.02	Orthogroups_2024-Update
Glyma.08G059000	No alias	FAD-binding Berberine family protein	0.06	Orthogroups_2024-Update
Glyma.08G080200	No alias	FAD-binding Berberine family protein	0.04	Orthogroups_2024-Update
Glyma.15G133200	No alias	FAD-binding Berberine family protein	0.06	Orthogroups_2024-Update
Glyma.15G134200	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Potri.011G162800	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Sobic.010G162900.1	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012951	BBE	463	520
IPR006094	Oxid_FAD_bind_N	69	206

External Links

No external refs found!