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  5. Potri.011G159000

Potri.011G159000


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.011G159000
Cluster HCCA clusters: cluster_0011

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04641 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g18030 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.G00978.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.H02210.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.10G103200 No alias polygalacturonase abscission zone A. thaliana 0.03 Orthogroups_2024-Update
HORVU1Hr1G079140.6 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
PSME_00006809-RA No alias (at1g23460 : 407.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00040555-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 94 415
No external refs found!