1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.011G162732

Potri.011G162732


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.011G162732
Cluster HCCA clusters: cluster_0138

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.03 Orthogroups_2024-Update
AC203909.3_FG003 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
At1g26420 No alias Berberine bridge enzyme-like 7... 0.03 Orthogroups_2024-Update
Brara.I01846.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I02786.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G021740.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
HORVU7Hr1G089270.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os05g28490 No alias FAD-binding domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Pp1s128_133V6 No alias fad-binding protein 0.02 Orthogroups_2024-Update
Seita.4G178000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Seita.4G178100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Solyc02g069690 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44400.1) 0.03 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.02 Orthogroups_2024-Update
Solyc10g054460 No alias FAD-binding Berberine family protein, putative (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 468 526
IPR006094 Oxid_FAD_bind_N 77 213
No external refs found!