Potri.011G168800

Description : HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

Gene families : OG_42_0001716 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.011G168800
Cluster	HCCA clusters: cluster_0109

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g27060	No alias	high mobility group, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00043897-RA	No alias	(at1g04880 : 211.0) HMG (high mobility group) box...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009071	HMG_box_dom	244	311
IPR001606	ARID_dom	46	129

External Links

No external refs found!