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  5. Potri.012G002200

Potri.012G002200


Description : cyclic nucleotide gated channel 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G002200
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
A4A49_18102 No alias cyclic nucleotide-gated ion channel 1 0.04 Orthogroups_2024-Update
At2g28260 No alias Putative cyclic nucleotide-gated ion channel 15... 0.03 Orthogroups_2024-Update
At5g54250 No alias Cyclic nucleotide-gated ion channel 4... 0.03 Orthogroups_2024-Update
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Brara.I04513.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G135651 No alias cyclic nucleotide-gated channel 17 0.02 Orthogroups_2024-Update
Glyma.03G257133 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
HORVU6Hr1G079040.7 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
HORVU7Hr1G079400.3 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Kfl00280_0030 kfl00280_0030_v1.1 (at5g15410 : 444.0) 'defense, no death' gene (DND1)... 0.02 Orthogroups_2024-Update
MA_212367g0010 No alias (at3g17700 : 183.0) cyclic nucleotide-binding... 0.03 Orthogroups_2024-Update
Potri.012G038700 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Seita.1G014200.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Seita.4G044900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 502 591
IPR005821 Ion_trans_dom 90 408
No external refs found!