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  5. Potri.012G015400

Potri.012G015400


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0004912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G015400
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
At3g49240 No alias Pentatricopeptide repeat-containing protein At3g49240,... 0.07 Orthogroups_2024-Update
Bradi2g42630 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Brara.A02187.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F02071.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Glyma.04G235800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G128900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G052280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G254800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G208300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G210100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc03g083280 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Sopen03g023030 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 244
IPR002885 Pentatricopeptide_repeat 159 189
IPR002885 Pentatricopeptide_repeat 7 37
IPR002885 Pentatricopeptide_repeat 127 152
IPR002885 Pentatricopeptide_repeat 48 76
IPR002885 Pentatricopeptide_repeat 270 297
IPR002885 Pentatricopeptide_repeat 87 116
No external refs found!