1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g014840

Solyc01g014840


Description : disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g014840
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
429055 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
A4A49_29374 No alias tmv resistance protein n 0.06 Orthogroups_2024-Update
At5g38350 No alias Disease resistance protein (NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Brara.B00767.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.C00933.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.F01652.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01803.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.J01787.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Glyma.02G284100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.03G048500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.09G161400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G137600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
MA_36510g0030 No alias (at1g27170 : 334.0) transmembrane receptors;ATP binding;... 0.05 Orthogroups_2024-Update
MA_64427g0010 No alias (at5g36930 : 87.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_746330g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_83092g0010 No alias (at5g36930 : 102.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
MA_9114192g0010 No alias (at3g04220 : 155.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_928125g0010 No alias (at5g36930 : 187.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00004855-RA No alias (at5g36930 : 118.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00006302-RA No alias (at1g72840 : 118.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00017101-RA No alias (at5g36930 : 209.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00018710-RA No alias (at1g69550 : 113.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00024230-RA No alias (at1g27170 : 392.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
PSME_00031650-RA No alias (at5g36930 : 116.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00041991-RA No alias (at1g27180 : 111.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00042109-RA No alias (at5g36930 : 115.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.019G001701 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.T038900 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Pp1s14_170V6 No alias tir-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update
Solyc05g007850 No alias bacterial spot disease resistance protein 4 0.03 Orthogroups_2024-Update
Solyc09g007710 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
Solyc11g062150 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Solyc12g096880 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Sopen04g002380 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen06g023620 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 12 180
IPR002182 NB-ARC 196 441
No external refs found!