Potri.012G055100

Description : zinc finger protein-related

Gene families : OG_42_0002047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.012G055100
Cluster	HCCA clusters: cluster_0043

Target	Alias	Description	ECC score	Gene Family Method
Brara.G03300.1	No alias	iron cation sensor protein *(HRZ/BRUTUS) & E3 ubiquitin...	0.03	Orthogroups_2024-Update
Kfl00143_0030	kfl00143_0030_v1....	(at1g74770 : 490.0) zinc ion binding; FUNCTIONS IN: zinc...	0.01	Orthogroups_2024-Update
PSME_00028490-RA	No alias	(at3g18290 : 905.0) Encodes BRUTUS (BTS), a putative E3...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012312	Haemerythrin-like	45	172
IPR012312	Haemerythrin-like	646	809
IPR012312	Haemerythrin-like	302	436
IPR001841	Znf_RING	1120	1162
IPR008913	Znf_CHY	992	1067
IPR039512	RCHY1_zinc-ribbon	1168	1225

External Links

No external refs found!