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  5. Potri.012G080200

Potri.012G080200


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G080200
Cluster HCCA clusters: cluster_0166

Target Alias Description ECC score Gene Family Method Actions
84442 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_00959 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_07003 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_21718 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_25971 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_32855 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
At2g33760 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 Orthogroups_2024-Update
At5g03800 No alias Glycosyltransferase (Fragment)... 0.04 Orthogroups_2024-Update
At5g40410 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.04 Orthogroups_2024-Update
Bradi1g72290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g41651 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g57730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g41840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.H00716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02104.1 No alias RNA editing factor *(RARE1) 0.03 Orthogroups_2024-Update
GRMZM2G175253 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G399433 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G481373 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G313300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G049800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G035330.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G061600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040610.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G011570.2 No alias RNA editing factor *(CRR22) 0.03 Orthogroups_2024-Update
LOC_Os01g45840 No alias CRR2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g08650 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g12510 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33700 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_153011g0010 No alias (at5g52630 : 607.0) Encodes a member of the DYW... 0.03 Orthogroups_2024-Update
MA_615077g0010 No alias (at3g12770 : 607.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_81436g0010 No alias (at4g21300 : 593.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00057248-RA No alias (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Potri.005G012600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Potri.012G109300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G001000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc12g096680 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen04g008620 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen10g030830 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g024580 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 149 174
IPR002885 Pentatricopeptide_repeat 661 685
IPR002885 Pentatricopeptide_repeat 358 381
IPR002885 Pentatricopeptide_repeat 560 583
IPR002885 Pentatricopeptide_repeat 386 410
IPR002885 Pentatricopeptide_repeat 177 205
IPR002885 Pentatricopeptide_repeat 252 277
IPR002885 Pentatricopeptide_repeat 283 329
IPR002885 Pentatricopeptide_repeat 586 633
IPR002885 Pentatricopeptide_repeat 485 531
No external refs found!