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  5. Potri.012G105900

Potri.012G105900


Description : CLPC homologue 1


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G105900
Cluster HCCA clusters: cluster_0105

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G162968 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Glyma.18G264400 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
HORVU1Hr1G068970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00000476-RA No alias (q6f2y7|hs101_orysa : 1375.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
PSME_00014106-RA No alias (at5g15450 : 850.0) Encodes a chloroplast-targeted... 0.02 Orthogroups_2024-Update
Pp1s252_87V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Sobic.001G333500.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.05 Orthogroups_2024-Update
Sobic.008G081900.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Sopen12g021150 No alias AAA domain (Cdc48 subfamily) 0.02 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 636 810
IPR004176 Clp_N 183 234
IPR004176 Clp_N 107 159
IPR019489 Clp_ATPase_C 817 896
IPR003959 ATPase_AAA_core 299 415
No external refs found!