1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.012G115200

Potri.012G115200


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G115200
Cluster HCCA clusters: cluster_0127

Target Alias Description ECC score Gene Family Method Actions
At1g11590 No alias Probable pectinesterase/pectinesterase inhibitor 19... 0.04 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G035100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G014500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g00190.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G414500.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Seita.3G174200.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G370300.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.008G131300.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc07g043240 No alias Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 68 229
No external refs found!