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Sopen12g021460


Description : AMP-binding enzyme


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g021460
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
173133 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Bradi3g05750 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00032156-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
Potri.001G036900 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Sobic.003G391600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 32 448
IPR025110 AMP-bd_C 457 532
No external refs found!