Potri.012G117800

Description : RAB homolog 1

Gene families : OG_42_0002001 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002001_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.012G117800
Cluster	HCCA clusters: cluster_0128

Target	Alias	Description	ECC score	Gene Family Method
Brara.A01057.1	No alias	vesicle tethering small GTPase *(RAB5) & F-class RAB GTPase	0.03	Orthogroups_2024-Update
Kfl00015_0500	kfl00015_0500_v1.1	(p29687\|rab5_tobac : 274.0) Ras-related protein Rab5 -...	0.02	Orthogroups_2024-Update
LOC_Os03g46390	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_10435945g0010	No alias	(p31583\|rhn1_nicpl : 267.0) Ras-related protein RHN1 -...	0.03	Orthogroups_2024-Update
PSME_00042456-RA	No alias	(p31583\|rhn1_nicpl : 169.0) Ras-related protein RHN1 -...	0.04	Orthogroups_2024-Update
Sobic.008G185400.1	No alias	F-class RAB GTPase & vesicle tethering small GTPase *(RAB5)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	12	171

External Links

No external refs found!