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  5. Potri.012G122800

Potri.012G122800


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0008902 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G122800
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G032270.20 No alias ndhA-specific mRNA splicing factor 0.03 Orthogroups_2024-Update
LOC_Os02g07360 No alias pentatricopeptide containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G073000.1 No alias ndhA-specific mRNA splicing factor 0.02 Orthogroups_2024-Update
Sopen02g017930 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 492 539
IPR002885 Pentatricopeptide_repeat 281 340
IPR002885 Pentatricopeptide_repeat 154 201
IPR002885 Pentatricopeptide_repeat 223 268
IPR033443 PPR_long 350 462
No external refs found!