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  5. Potri.013G008100

Potri.013G008100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G008100
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
At5g55590 No alias Pectinesterase QRT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM79] 0.04 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G120779 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G177940 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G025500 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s118_31V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_157V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.2G137200.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Sopen01g030950 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 39 328
No external refs found!