1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.013G028800

Potri.013G028800


Description : Histone superfamily protein


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G028800
Cluster HCCA clusters: cluster_0142

Target Alias Description ECC score Gene Family Method Actions
Bradi2g23090 No alias histone H2A 12 0.05 Orthogroups_2024-Update
Brara.B01060.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Brara.F02852.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
GRMZM2G130746 No alias histone H2A 12 0.03 Orthogroups_2024-Update
HORVU6Hr1G006080.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
MA_22203g0020 No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.02 Orthogroups_2024-Update
PSME_00033712-RA No alias (q75l11|h2a6_orysa : 158.0) Probable histone H2A.6 -... 0.02 Orthogroups_2024-Update
Pp1s72_85V6 No alias histone h2a 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 100 133
IPR007125 Histone_H2A/H2B/H3 19 97
No external refs found!