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  5. Sopen12g022730

Sopen12g022730


Description : Cotton fibre expressed protein


Gene families : OG_42_0000960 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g022730
Cluster HCCA clusters: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
At1g52140 No alias Avr9/Cf-9 rapidly elicited protein... 0.04 Orthogroups_2024-Update
GRMZM2G116029 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM5G891967 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.13G355100 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G019100 No alias Function unknown 0.04 Orthogroups_2024-Update
HORVU3Hr1G024490.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g36070 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_49467g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.018G046500 No alias Function unknown 0.03 Orthogroups_2024-Update
Sobic.010G165200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008480 DUF761_pln 189 209
No external refs found!