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  5. Potri.013G108200

Potri.013G108200


Description : cyclic nucleotide-gated channel 18


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G108200
Cluster HCCA clusters: cluster_0164

Target Alias Description ECC score Gene Family Method Actions
At2g28260 No alias Putative cyclic nucleotide-gated ion channel 15... 0.04 Orthogroups_2024-Update
Bradi1g46970 No alias cyclic nucleotide-gated channel 17 0.02 Orthogroups_2024-Update
Mp5g07780.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Orthogroups_2024-Update
evm.model.tig00021348.58 No alias (at1g19780 : 96.3) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 49 389
IPR000595 cNMP-bd_dom 484 572
No external refs found!