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  5. Potri.013G132500

Potri.013G132500


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G132500
Cluster HCCA clusters: cluster_0096

Target Alias Description ECC score Gene Family Method Actions
406783 No alias PENTATRICOPEPTIDE REPEAT 596 0.02 Orthogroups_2024-Update
At5g09450 No alias Pentatricopeptide repeat-containing protein At5g09450,... 0.03 Orthogroups_2024-Update
GRMZM2G160994 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.4G018800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G203600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G078100.1 No alias RNA editing factor *(POCO) 0.03 Orthogroups_2024-Update
Sopen01g035710 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen07g031410 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen11g002280 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 175
IPR002885 Pentatricopeptide_repeat 323 344
IPR002885 Pentatricopeptide_repeat 361 387
IPR002885 Pentatricopeptide_repeat 178 223
No external refs found!