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  5. Potri.013G132700

Potri.013G132700


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.013G132700
Cluster HCCA clusters: cluster_0067

Target Alias Description ECC score Gene Family Method Actions
402120 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
420704 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
55637 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
A4A49_09610 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.02 Orthogroups_2024-Update
At1g15480 No alias Pentatricopeptide repeat-containing protein At1g15480,... 0.04 Orthogroups_2024-Update
Brara.B00312.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G131817 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G160994 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G011200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G176700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G297800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g19490 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
MA_77400g0010 No alias (at1g15480 : 202.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Seita.1G351200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G083900.1 No alias RNA editing factor *(POCO) 0.03 Orthogroups_2024-Update
Seita.4G018800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G203600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g035710 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen02g023200 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen07g028030 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen07g031410 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen12g010730 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 168 214
IPR002885 Pentatricopeptide_repeat 349 376
IPR002885 Pentatricopeptide_repeat 312 337
IPR002885 Pentatricopeptide_repeat 136 165
No external refs found!