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  5. Sopen12g023220

Sopen12g023220


Description : DEAD/DEAH box helicase


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g023220
Cluster HCCA clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Brara.I00728.1 No alias regulatory RNA helicase *(RH20/RH30) of virus replication 0.03 Orthogroups_2024-Update
Seita.8G239700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.contig_2502.9 No alias (at1g55150 : 425.0) DEA(D/H)-box RNA helicase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 327 436
IPR011545 DEAD/DEAH_box_helicase_dom 120 291
No external refs found!