Solyc03g006320

Description : Ethylene-responsive transcription factor, putative (AHRD V3.3 *-* B9RVV2_RICCO)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g006320
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_16120	No alias	ethylene-responsive transcription factor erf061	0.05	Orthogroups_2024-Update
A4A49_21979	No alias	ethylene-responsive transcription factor erf034	0.03	Orthogroups_2024-Update
A4A49_34891	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_40092	No alias	ethylene-responsive transcription factor crf2	0.04	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00526.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.F02040.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.G00808.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Brara.G01933.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
GRMZM2G018398	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
GRMZM2G380377	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.06G111300	No alias	Integrase-type DNA-binding superfamily protein	0.07	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.10G239300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G226600	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Glyma.13G304300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
LOC_Os02g45450	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_108992g0010	No alias	(at1g74930 : 121.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_164803g0010	No alias	(at5g11590 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_2446g0010	No alias	(at2g20880 : 136.0) Integrase-type DNA-binding...	0.02	Orthogroups_2024-Update
MA_329325g0010	No alias	(at4g17500 : 94.0) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
MA_463250g0010	No alias	(at5g11590 : 121.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_4929994g0010	No alias	(original description: no original description)	0.02	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_83118g0010	No alias	(at1g78080 : 90.5) Encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00004891-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.05	Orthogroups_2024-Update
PSME_00005186-RA	No alias	(at4g17500 : 141.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00008891-RA	No alias	(at4g17500 : 93.6) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.05	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00056380-RA	No alias	(at4g17500 : 89.7) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
Potri.001G079600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.001G079800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.010G072600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s162_92V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G184300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077370	No alias	Ethylene Response Factor C.5	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.03	Orthogroups_2024-Update
Sopen05g008450	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	23	72

External Links

No external refs found!

Solyc03g006320

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation