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  5. Potri.013G145000

Potri.013G145000


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G145000
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
74749 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
82058 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g69800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g29450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G138303 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G093800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
PSME_00056296-RA No alias (at4g13650 : 664.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00056460-RA No alias (at4g21300 : 575.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Solyc07g008480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen03g035770 No alias PPR repeat family 0.03 Orthogroups_2024-Update
evm.model.tig00001038.5 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 500 522
IPR002885 Pentatricopeptide_repeat 201 223
IPR002885 Pentatricopeptide_repeat 566 595
IPR002885 Pentatricopeptide_repeat 331 355
IPR002885 Pentatricopeptide_repeat 426 472
IPR002885 Pentatricopeptide_repeat 226 274
IPR002885 Pentatricopeptide_repeat 125 172
No external refs found!