Sopen12g023310

Description : Fatty acid desaturase

Gene families : OG_42_0001417 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001417_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g023310
Cluster	HCCA clusters: Cluster_392

Target	Alias	Description	ECC score	Gene Family Method
Sobic.004G260600.1	No alias	delta-12/delta-15 fatty acid desaturase	0.02	Orthogroups_2024-Update
Sobic.004G260800.1	No alias	delta-12/delta-15 fatty acid desaturase	0.02	Orthogroups_2024-Update
Solyc04g040130	No alias	Fatty acid desaturase (AHRD V3.3 *** I3RV99_9ERIC)	0.03	Orthogroups_2024-Update
Sopen12g034870	No alias	Fatty acid desaturase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEA	InterProScan predictions
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005804	FA_desaturase_dom	86	346
IPR021863	FAS_N	14	63

External Links

No external refs found!