Description : Retrotransposon gag protein
Gene families : OG_42_0001127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen12g023320 | |
Cluster | HCCA clusters: Cluster_161 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Kfl00968_g1 | kfl00968_g1_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Sopen07g011820 | No alias | Aspartyl protease | 0.03 | Orthogroups_2024-Update | |
Sopen10g020230 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
Sopen12g027350 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2390.1 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2498.2 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3711.2 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3776.1 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_3777.1 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4579.1 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4586.1 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_4650.1 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005162 | Retrotrans_gag_dom | 186 | 266 |
No external refs found! |