Sopen12g023890

Description : Nuclear pore protein 84 / 107

Gene families : OG_42_0002498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002498_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g023890
Cluster	HCCA clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
182361	No alias	Function unknown	0.03	Orthogroups_2024-Update
Brara.K01058.1	No alias	scaffold nucleoporin of nuclear pore complex *(NUP107)	0.02	Orthogroups_2024-Update
Cre10.g425675	No alias	Function unknown	0.03	Orthogroups_2024-Update
Mp3g23360.1	No alias	NUP107 scaffold nucleoporin of nuclear pore complex	0.03	Orthogroups_2024-Update
Seita.8G213100.1	No alias	scaffold nucleoporin of nuclear pore complex *(NUP107)	0.03	Orthogroups_2024-Update
Sobic.005G199200.1	No alias	scaffold nucleoporin of nuclear pore complex *(NUP107)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	InterProScan predictions
MF	GO:0017056	structural constituent of nuclear pore	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007252	Nup84/Nup107	185	857

External Links

No external refs found!