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  5. Potri.014G050300

Potri.014G050300


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.014G050300
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
402120 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
406783 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
420704 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
421992 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
444770 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00312.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G105229 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G135940 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G000600 No alias PENTATRICOPEPTIDE REPEAT 596 0.04 Orthogroups_2024-Update
Glyma.03G108100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G119200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G203800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G129900 No alias PENTATRICOPEPTIDE REPEAT 596 0.06 Orthogroups_2024-Update
HORVU2Hr1G093220.6 No alias splicing factor *(CRR16) 0.05 Orthogroups_2024-Update
HORVU3Hr1G040710.1 No alias RNA editing factor *(POCO) 0.03 Orthogroups_2024-Update
LOC_Os04g46010 No alias PPR repeat domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os12g07260 No alias PPR repeat domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00052183-RA No alias (at1g02150 : 315.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Potri.013G133000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G158100.1 No alias splicing factor *(CRR16) 0.08 Orthogroups_2024-Update
Seita.3G349700.1 No alias splicing factor *(RTP7) 0.06 Orthogroups_2024-Update
Seita.9G203100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g089870 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.09 Orthogroups_2024-Update
Sopen01g035710 No alias PPR repeat 0.1 Orthogroups_2024-Update
Sopen11g002280 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 229 287
IPR002885 Pentatricopeptide_repeat 350 374
IPR002885 Pentatricopeptide_repeat 386 412
IPR002885 Pentatricopeptide_repeat 173 201
No external refs found!