Sopen12g024250

Description : KH domain

Gene families : OG_42_0000643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g024250
Cluster	HCCA clusters: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
At5g15270	No alias	RNA-binding KH domain-containing protein...	0.03	Orthogroups_2024-Update
Glyma.07G020300	No alias	RNA-binding KH domain-containing protein	0.02	Orthogroups_2024-Update
Glyma.19G024400	No alias	RNA-binding KH domain-containing protein	0.04	Orthogroups_2024-Update
LOC_Os03g25970	No alias	KH domain-containing protein, putative, expressed	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	187	250
IPR004088	KH_dom_type_1	397	462
IPR004088	KH_dom_type_1	62	110
IPR004088	KH_dom_type_1	312	363
IPR004088	KH_dom_type_1	572	635

External Links

No external refs found!