Sopen12g024470


Description : Domain of unknown function (DUF4219)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g024470
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Kfl01111_0020 kfl01111_0020_v1.1 (original description: no original description) 0.01 Orthogroups_2024-Update
Solyc08g061870 No alias No description available 0.03 Orthogroups_2024-Update
Sopen00g011290 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen01g003530 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen01g020160 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen01g028070 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen03g025800 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen06g004750 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen06g015850 No alias gag-polypeptide of LTR copia-type 0.02 Orthogroups_2024-Update
Sopen07g023540 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen09g024800 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen11g018860 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen12g024140 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025314 DUF4219 27 52
No external refs found!