1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.014G174000

Potri.014G174000


Description : ribosomal protein L5 B


Gene families : OG_42_0001609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.014G174000
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
144921 No alias ribosomal protein L5 0.04 Orthogroups_2024-Update
A4A49_19400 No alias 60s ribosomal protein l5 0.08 Orthogroups_2024-Update
At5g39740 No alias RPL5B [Source:UniProtKB/TrEMBL;Acc:A0A178UJU5] 0.08 Orthogroups_2024-Update
Bradi1g13630 No alias ribosomal protein L5 B 0.06 Orthogroups_2024-Update
Bradi4g13640 No alias ribosomal protein L5 0.12 Orthogroups_2024-Update
Bradi5g09500 No alias ribosomal protein L5 B 0.07 Orthogroups_2024-Update
Brara.C04001.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.C04002.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Brara.F03014.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.G00424.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Cre14.g621450 No alias ribosomal protein L5 B 0.05 Orthogroups_2024-Update
Glyma.07G059900 No alias ribosomal protein L5 B 0.05 Orthogroups_2024-Update
Glyma.07G060000 No alias ribosomal protein L5 B 0.05 Orthogroups_2024-Update
Glyma.13G280300 No alias ribosomal protein L5 B 0.03 Orthogroups_2024-Update
Glyma.16G028800 No alias ribosomal protein L5 B 0.08 Orthogroups_2024-Update
HORVU2Hr1G073320.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
HORVU5Hr1G092630.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
MA_70965g0010 No alias (q6unt2|rl5_cucsa : 417.0) 60S ribosomal protein L5 -... 0.06 Orthogroups_2024-Update
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.05 Orthogroups_2024-Update
Pp1s364_3V6 No alias ribosomal protein 0.09 Orthogroups_2024-Update
Pp1s38_329V6 No alias ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s97_115V6 No alias ribosomal protein 0.08 Orthogroups_2024-Update
Seita.5G413500.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.001G517600.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G387900.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Solyc06g007670 No alias 60S ribosomal protein L5 (AHRD V3.3 *** RL5_CUCSA) 0.13 Orthogroups_2024-Update
Solyc06g082870 No alias 60S ribosomal protein L5-like protein (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc09g020130 No alias 60S ribosomal protein L5 (AHRD V3.3 *** RL5_CUCSA) 0.03 Orthogroups_2024-Update
Sopen06g034230 No alias Ribosomal L18p/L5e family 0.04 Orthogroups_2024-Update
evm.model.contig_3443.5 No alias (q6unt2|rl5_cucsa : 302.0) 60S ribosomal protein L5 -... 0.11 Orthogroups_2024-Update
evm.model.tig00000194.49 No alias (o65353|rl5_helan : 322.0) 60S ribosomal protein L5 -... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0008097 5S rRNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 14 175
IPR025607 Rbsml_L5e/L18P_C 191 281
No external refs found!