Potri.014G178500

Description : Sec23/Sec24 protein transport family protein

Gene families : OG_42_0001214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.014G178500
Cluster	HCCA clusters: cluster_0044

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g38100	No alias	Sec23/Sec24 protein transport family protein	0.04	Orthogroups_2024-Update
Glyma.05G149951	No alias	Sec23/Sec24 protein transport family protein	0.02	Orthogroups_2024-Update
Glyma.16G082400	No alias	Sec23/Sec24 protein transport family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G068810.2	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex	0.02	Orthogroups_2024-Update
PSME_00005882-RA	No alias	(at5g43670 : 881.0) Sec23/Sec24 protein transport family...	0.03	Orthogroups_2024-Update
Solyc05g053830	No alias	Protein transport protein sec23, putative (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006896	Sec23/24_trunk_dom	124	392
IPR006900	Sec23/24_helical_dom	523	620
IPR006895	Znf_Sec23_Sec24	54	92
IPR012990	Sec23_24_beta_S	404	509
IPR007123	Gelsolin-like_dom	637	723

External Links

No external refs found!

Potri.014G178500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation