Potri.015G020800

Description : polypyrimidine tract-binding protein 2

Gene families : OG_42_0002256 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002256_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.015G020800
Cluster	HCCA clusters: cluster_0189

Target	Alias	Description	ECC score	Gene Family Method
At5g53180	No alias	Polypyrimidine tract-binding protein homolog 2...	0.03	Orthogroups_2024-Update
Potri.012G029300	No alias	polypyrimidine tract-binding protein 2	0.04	Orthogroups_2024-Update
Pp1s326_1V6	No alias	polypyrimidine tract binding	0.03	Orthogroups_2024-Update
Sobic.001G356500.1	No alias	RNA splicing factor *(PTB)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021790	DUF3355	243	321
IPR000504	RRM_dom	22	73
IPR000504	RRM_dom	129	179

External Links

No external refs found!