1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.015G031000

Potri.015G031000


Description : ARM repeat superfamily protein


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G031000
Cluster HCCA clusters: cluster_0162

Target Alias Description ECC score Gene Family Method Actions
416356 No alias plant U-box 24 0.03 Orthogroups_2024-Update
426053 No alias plant U-box 24 0.02 Orthogroups_2024-Update
Brara.D00589.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G055052 No alias CYS, MET, PRO, and GLY protein 1 0.02 Orthogroups_2024-Update
GRMZM2G071484 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Glyma.12G189000 No alias plant U-box 23 0.02 Orthogroups_2024-Update
Glyma.14G212200 No alias CYS, MET, PRO, and GLY protein 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G076470.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g34410 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g34030 No alias U-box domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g35680 No alias U-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_8030489g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G137700 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G101100 No alias plant U-box 23 0.04 Orthogroups_2024-Update
Potri.016G069400 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Pp1s356_21V6 No alias F11F19.16; U-box domain-containing protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s67_203V6 No alias MLD14.11; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G293600.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G101150.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.03 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update
Sopen04g003240 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 23 94
No external refs found!