1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.015G060100

Potri.015G060100


Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G060100
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
A4A49_19523 No alias cobra-like protein 4 0.06 Orthogroups_2024-Update
At1g09790 No alias COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500] 0.03 Orthogroups_2024-Update
At5g60920 No alias Protein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8] 0.03 Orthogroups_2024-Update
Bradi1g08130 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.06 Orthogroups_2024-Update
Bradi1g08310 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Orthogroups_2024-Update
Bradi1g22030 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Bradi1g59880 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.08 Orthogroups_2024-Update
Brara.B00610.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.08 Orthogroups_2024-Update
Brara.C00685.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.07 Orthogroups_2024-Update
Brara.K01845.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.06 Orthogroups_2024-Update
Glyma.04G160100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.18G272100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
HORVU3Hr1G007580.3 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.02 Orthogroups_2024-Update
HORVU5Hr1G025760.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
PSME_00031309-RA No alias (q6z4g8|cobl1_orysa : 643.0) COBRA-like 1 protein... 0.03 Orthogroups_2024-Update
PSME_00041222-RA No alias (q60e70|cobl3_orysa : 636.0) COBRA-like 3 protein... 0.04 Orthogroups_2024-Update
Pp1s44_119V6 No alias protein cobra 0.03 Orthogroups_2024-Update
Seita.9G088500.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.05 Orthogroups_2024-Update
Sobic.002G368300.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.02 Orthogroups_2024-Update
Solyc01g103860 No alias COBRA-like protein (AHRD V3.3 *** L0AST8_POPTO) 0.03 Orthogroups_2024-Update
Solyc02g065770 No alias COBRA protein (AHRD V3.3 *** K4B708_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g019240 No alias COBRA-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006918 COBRA_pln 15 178
No external refs found!