Potri.015G060400

Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.015G060400
Cluster	HCCA clusters: cluster_0162

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19670	No alias	squamosa promoter-binding-like protein 6	0.03	Orthogroups_2024-Update
Bradi3g40030	No alias	squamosa promoter binding protein-like 9	0.03	Orthogroups_2024-Update
Brara.E02615.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01777.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
Cre07.g345050	No alias	squamosa promoter binding protein-like 10	0.02	Orthogroups_2024-Update
Glyma.01G075900	No alias	squamosa promoter binding protein-like 8	0.03	Orthogroups_2024-Update
Glyma.03G143100	No alias	squamosa promoter binding protein-like 9	0.04	Orthogroups_2024-Update
Glyma.13G237400	No alias	squamosa promoter binding protein-like 3	0.03	Orthogroups_2024-Update
LOC_Os02g04680	No alias	OsSPL3 - SBP-box gene family member, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g32170	No alias	OsSPL13 - SBP-box gene family member, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g30370	No alias	OsSPL19 - SBP-box gene family member, expressed	0.02	Orthogroups_2024-Update
PSME_00047223-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Potri.001G058600	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	176	249

External Links

No external refs found!