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  5. Potri.015G069100

Potri.015G069100


Description : plastid transcriptionally active 2


Gene families : OG_42_0006924 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G069100
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
Bradi1g03450 No alias plastid transcriptionally active 2 0.04 Orthogroups_2024-Update
HORVU5Hr1G114630.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2) 0.03 Orthogroups_2024-Update
Kfl00005_0390 kfl00005_0390_v1.1 (at1g74850 : 553.0) Present in transcriptionally active... 0.02 Orthogroups_2024-Update
Seita.9G030000.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2) 0.03 Orthogroups_2024-Update
Solyc03g113630 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 387 434
IPR002885 Pentatricopeptide_repeat 531 559
IPR002885 Pentatricopeptide_repeat 601 627
IPR002885 Pentatricopeptide_repeat 569 595
IPR002885 Pentatricopeptide_repeat 236 296
IPR002885 Pentatricopeptide_repeat 446 504
IPR002885 Pentatricopeptide_repeat 165 223
IPR002885 Pentatricopeptide_repeat 306 366
No external refs found!