Potri.015G069700

Description : Coatomer, alpha subunit

Gene families : OG_42_0002646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.015G069700
Cluster	HCCA clusters: cluster_0152

Target	Alias	Description	ECC score	Gene Family Method
Glyma.11G113000	No alias	Coatomer, alpha subunit	0.03	Orthogroups_2024-Update
HORVU4Hr1G007520.2	No alias	subunit alpha of coat protein complex	0.03	Orthogroups_2024-Update
Kfl00045_0430	kfl00045_0430_v1.1	(at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS...	0.01	Orthogroups_2024-Update
PSME_00051512-RA	No alias	(at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS...	0.03	Orthogroups_2024-Update
Pp1s135_34V6	No alias	coatomer alpha	0.02	Orthogroups_2024-Update
Sobic.001G117800.1	No alias	subunit alpha of coat protein complex	0.03	Orthogroups_2024-Update
Sobic.003G029600.1	No alias	subunit alpha of coat protein complex	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
CC	GO:0030117	membrane coat	IEA	InterProScan predictions
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044431	Golgi apparatus part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	84	121
IPR001680	WD40_repeat	198	231
IPR001680	WD40_repeat	45	79
IPR001680	WD40_repeat	241	276
IPR001680	WD40_repeat	126	163
IPR010714	Coatomer_asu_C	815	1218
IPR006692	Coatomer_WD-assoc_reg	342	768

External Links

No external refs found!

Potri.015G069700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation