1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.015G092900

Potri.015G092900


Description : homolog of nucleolar protein NOP56


Gene families : OG_42_0003242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003242_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G092900
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
167367 No alias homolog of nucleolar protein NOP56 0.04 Orthogroups_2024-Update
A4A49_34611 No alias putative nucleolar protein 5-2 0.02 Orthogroups_2024-Update
At1g56110 No alias At1g56110/T6H22_9 [Source:UniProtKB/TrEMBL;Acc:Q9SGT7] 0.06 Orthogroups_2024-Update
Bradi1g18730 No alias NOP56-like pre RNA processing ribonucleoprotein 0.1 Orthogroups_2024-Update
Bradi1g32180 No alias homolog of nucleolar protein NOP56 0.08 Orthogroups_2024-Update
Brara.C03437.1 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.09 Orthogroups_2024-Update
Brara.F00004.1 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.1 Orthogroups_2024-Update
Brara.H00011.1 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.08 Orthogroups_2024-Update
Cre12.g525200 No alias homolog of nucleolar protein NOP56 0.08 Orthogroups_2024-Update
GRMZM2G110233 No alias homolog of nucleolar protein NOP56 0.03 Orthogroups_2024-Update
HORVU1Hr1G083960.3 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.05 Orthogroups_2024-Update
HORVU2Hr1G022140.3 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.03 Orthogroups_2024-Update
LOC_Os03g22880 No alias nucleolar protein 5A, putative, expressed 0.04 Orthogroups_2024-Update
Mp2g23840.1 No alias snoRNP scaffold component Nop56 of snoRNP rRNA... 0.04 Orthogroups_2024-Update
Pp1s15_447V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.9G403000.1 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.07 Orthogroups_2024-Update
Sobic.001G371100.1 No alias scaffold component *(Nop56) of snoRNP rRNA methylation complex 0.08 Orthogroups_2024-Update
Solyc01g100570 No alias Nucleolar protein NOP56 (AHRD V3.3 *** A0A061G5W0_THECC) 0.08 Orthogroups_2024-Update
Sopen01g044070 No alias Putative snoRNA binding domain 0.05 Orthogroups_2024-Update
evm.model.tig00001073.20 No alias (at1g56110 : 570.0) NOP56-like protein; homolog of... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012974 NOP5_N 4 69
IPR002687 Nop_dom 177 409
No external refs found!