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  5. Potri.015G133400

Potri.015G133400


Description : DEAD box RNA helicase (PRH75)


Gene families : OG_42_0000844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G133400
Cluster HCCA clusters: cluster_0188

Target Alias Description ECC score Gene Family Method Actions
Bradi4g35490 No alias DEAD box RNA helicase (PRH75) 0.03 Orthogroups_2024-Update
Brara.A02729.1 No alias group-II intron splicing RNA helicase *(PMH) 0.03 Orthogroups_2024-Update
Brara.I00503.1 No alias group-II intron splicing RNA helicase *(RH3) 0.04 Orthogroups_2024-Update
Glyma.14G033400 No alias putative mitochondrial RNA helicase 2 0.03 Orthogroups_2024-Update
LOC_Os12g41715 No alias DEAD-box ATP-dependent RNA helicase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.2G278900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G386700.1 No alias group-II intron splicing RNA helicase *(PMH) 0.03 Orthogroups_2024-Update
Sopen03g003010 No alias DEAD/DEAH box helicase 0.03 Orthogroups_2024-Update
evm.model.tig00020734.25 No alias (at3g22330 : 256.0) DEAD-box protein required for... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 126 303
IPR001650 Helicase_C 347 447
IPR012562 GUCT 536 631
No external refs found!