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  5. Potri.016G006800

Potri.016G006800


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0001517 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G006800
Cluster HCCA clusters: cluster_0059

Target Alias Description ECC score Gene Family Method Actions
At5g46580 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 Orthogroups_2024-Update
Bradi1g01021 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Brara.F03614.1 No alias endoribonuclease *(SOT1) 0.05 Orthogroups_2024-Update
Brara.H00857.1 No alias plastidial RNA processing factor *(SVR7) 0.05 Orthogroups_2024-Update
GRMZM2G017593 No alias pentatricopeptide (PPR) repeat-containing protein 0.05 Orthogroups_2024-Update
Glyma.05G113300 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.09G013300 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.09G013500 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Glyma.09G013600 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.15G118300 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.17G006500 No alias pentatricopeptide (PPR) repeat-containing protein 0.08 Orthogroups_2024-Update
Glyma.17G153900 No alias pentatricopeptide (PPR) repeat-containing protein 0.06 Orthogroups_2024-Update
HORVU5Hr1G124070.4 No alias endoribonuclease *(SOT1) 0.04 Orthogroups_2024-Update
Solyc08g077140 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen08g025700 No alias PPR repeat family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 276 327
IPR002885 Pentatricopeptide_repeat 176 219
IPR002885 Pentatricopeptide_repeat 241 271
IPR033443 PPR_long 370 507
IPR002885 Pentatricopeptide_repeat 560 581
No external refs found!