Potri.016G024300

Description : embryo sac development arrest 14

Gene families : OG_42_0005493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005493_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.016G024300
Cluster	HCCA clusters: cluster_0071

Target	Alias	Description	ECC score	Gene Family Method
At3g60360	No alias	U3 small nucleolar RNA-associated protein 11...	0.03	Orthogroups_2024-Update
Brara.D00165.1	No alias	SSU processome assembly factor *(UTP11)	0.03	Orthogroups_2024-Update
Cre13.g573050	No alias	embryo sac development arrest 14	0.03	Orthogroups_2024-Update
Solyc10g079430	No alias	U3 small nucleolar RNA-associated protein 11 (AHRD V3.3...	0.06	Orthogroups_2024-Update
Sopen10g030070	No alias	Utp11 protein	0.02	Orthogroups_2024-Update
evm.model.contig_4447.2	No alias	(at3g60360 : 109.0) EMBRYO SAC DEVELOPMENT ARREST 14...	0.01	Orthogroups_2024-Update
evm.model.tig00020903.46	No alias	(q8s1z1\|utp11_orysa : 174.0) Probable U3 small nucleolar...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	InterProScan predictions
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
CC	GO:0030684	preribosome	None	Extended
CC	GO:0032040	small-subunit processome	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007144	SSU_processome_Utp11	10	229

External Links

No external refs found!