Potri.016G036100


Description : PENTATRICOPEPTIDE REPEAT 596


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G036100
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
402120 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
402187 No alias protein kinase family protein 0.02 Orthogroups_2024-Update
406783 No alias PENTATRICOPEPTIDE REPEAT 596 0.02 Orthogroups_2024-Update
420704 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
At1g02370 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.06 Orthogroups_2024-Update
At1g15480 No alias Pentatricopeptide repeat-containing protein At1g15480,... 0.04 Orthogroups_2024-Update
At1g80270 No alias PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6] 0.07 Orthogroups_2024-Update
At4g01990 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.05 Orthogroups_2024-Update
At5g09450 No alias Pentatricopeptide repeat-containing protein At5g09450,... 0.05 Orthogroups_2024-Update
Bradi1g49750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Orthogroups_2024-Update
Bradi2g10850 No alias PENTATRICOPEPTIDE REPEAT 596 0.07 Orthogroups_2024-Update
Bradi3g30090 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g30100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00312.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F01064.1 No alias RNA editing factor *(POCO) 0.08 Orthogroups_2024-Update
Brara.G02029.1 No alias RNA editing factor *(POCO) 0.1 Orthogroups_2024-Update
GRMZM2G131817 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G135940 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G143777 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G000600 No alias PENTATRICOPEPTIDE REPEAT 596 0.06 Orthogroups_2024-Update
Glyma.08G176700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.10G000600 No alias PENTATRICOPEPTIDE REPEAT 596 0.05 Orthogroups_2024-Update
Glyma.10G011800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G129900 No alias PENTATRICOPEPTIDE REPEAT 596 0.03 Orthogroups_2024-Update
HORVU2Hr1G120330.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G011310.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g19490 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g35730 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
MA_492314g0010 No alias (at1g80270 : 290.0) PENTATRICOPEPTIDE REPEAT 596... 0.03 Orthogroups_2024-Update
PSME_00009444-RA No alias (at1g60770 : 343.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.2G083900.1 No alias RNA editing factor *(POCO) 0.02 Orthogroups_2024-Update
Seita.3G349700.1 No alias splicing factor *(RTP7) 0.04 Orthogroups_2024-Update
Seita.4G018800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G038700.1 No alias RNA editing factor *(POCO) 0.04 Orthogroups_2024-Update
Sobic.002G078100.1 No alias RNA editing factor *(POCO) 0.05 Orthogroups_2024-Update
Sobic.003G134000.2 No alias RNA editing factor *(POCO) 0.04 Orthogroups_2024-Update
Sobic.003G144000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G100000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G018900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g079320 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Solyc06g005140 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc10g047370 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g006380 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc12g020050 No alias DNA-binding protein DQ117941 0.03 Orthogroups_2024-Update
Sopen01g035710 No alias PPR repeat 0.05 Orthogroups_2024-Update
Sopen07g031410 No alias PPR repeat 0.07 Orthogroups_2024-Update
Sopen11g002280 No alias PPR repeat 0.05 Orthogroups_2024-Update
Sopen12g010730 No alias PPR repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033443 PPR_long 435 575
IPR033443 PPR_long 252 411
No external refs found!