Potri.016G046600

Description : KH domain-containing protein / zinc finger (CCCH type) family protein

Gene families : OG_42_0001307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.016G046600
Cluster	HCCA clusters: cluster_0131

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g35920	No alias	KH domain-containing protein / zinc finger (CCCH type)...	0.02	Orthogroups_2024-Update
Sobic.010G193800.1	No alias	regulatory protein *(KHZ) of autonomous floral-promotion pathway	0.03	Orthogroups_2024-Update
Solyc01g073940	No alias	Zinc finger transcription factor 9	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	94	119
IPR000571	Znf_CCCH	37	61
IPR000571	Znf_CCCH	252	276
IPR004088	KH_dom_type_1	164	228

External Links

No external refs found!