1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.016G048500

Potri.016G048500


Description : squamosa promoter binding protein-like 9


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G048500
Cluster HCCA clusters: cluster_0148

Target Alias Description ECC score Gene Family Method Actions
Bradi2g59110 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Brara.D00262.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre06.g300600 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.01 Orthogroups_2024-Update
Glyma.04G197100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
PSME_00041406-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.002G142200 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
Potri.014G057700 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
Potri.015G098900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Seita.1G069300.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G432500.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen12g018830 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 82 155
No external refs found!