Potri.016G050400

Description : RAB GTPase homolog A4D

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.016G050400
Cluster	HCCA clusters: cluster_0176

Target	Alias	Description	ECC score	Gene Family Method
A4A49_30348	No alias	ras-related protein rab11d	0.03	Orthogroups_2024-Update
At4g18800	No alias	RABA1d [Source:UniProtKB/TrEMBL;Acc:A0A178V3A0]	0.03	Orthogroups_2024-Update
Bradi2g49900	No alias	RAB GTPase homolog A1B	0.03	Orthogroups_2024-Update
Brara.J00061.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Glyma.19G258000	No alias	RAB GTPase homolog A3	0.04	Orthogroups_2024-Update
LOC_Os01g47730	No alias	ras-related protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g60870	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g44070	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g48980	No alias	ras-related protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_15386g0010	No alias	(at5g60860 : 357.0) RAB GTPase homolog A1F (RABA1f);...	0.02	Orthogroups_2024-Update
Potri.006G057700	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update
Solyc11g010100	No alias	Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC)	0.02	Orthogroups_2024-Update
Sopen03g002280	No alias	Ras family	0.03	Orthogroups_2024-Update
evm.model.tig00020961.97	No alias	(q39572\|yptc6_chlre : 290.0) Ras-related protein YPTC6 -...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	16	176

External Links

No external refs found!