1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.016G053200

Potri.016G053200


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G053200
Cluster HCCA clusters: cluster_0160

Target Alias Description ECC score Gene Family Method Actions
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.03 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.03 Orthogroups_2024-Update
A4A49_20397 No alias dehydration-responsive element-binding protein 2d 0.01 Orthogroups_2024-Update
Bradi3g12566 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Brara.I00552.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G106591 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G119865 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G071270.4 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G065430.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
LOC_Os09g20350 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00032194-RA No alias (at4g17500 : 100.0) Encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G103100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G141500.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.02 Orthogroups_2024-Update
Solyc03g026270 No alias CBF 0.03 Orthogroups_2024-Update
Solyc05g050830 No alias Ethylene-responsive transcription factor4 0.02 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen06g018310 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen07g028150 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 28 78
No external refs found!