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  5. Potri.016G055000

Potri.016G055000


Description : Ribosomal protein S5 family protein


Gene families : OG_42_0002117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G055000
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
67484 No alias Ribosomal protein S5 family protein 0.05 Orthogroups_2024-Update
A4A49_17312 No alias 40s ribosomal protein s2-4 0.03 Orthogroups_2024-Update
At3g57490 No alias 40S ribosomal protein S2-4... 0.02 Orthogroups_2024-Update
Brara.C02137.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.E00249.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre01.g039250 No alias Ribosomal protein S5 family protein 0.02 Orthogroups_2024-Update
Mp5g05010.1 No alias component RPS2 of SSU proteome 0.02 Orthogroups_2024-Update
Pp1s10_190V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s274_5V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s400_15V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s411_32V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Seita.9G044700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G046100.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.001G046300.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc04g074300 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.04 Orthogroups_2024-Update
evm.model.contig_4442.1 No alias (at1g58684 : 326.0) Ribosomal protein S5 family protein;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 173 239
IPR013810 Ribosomal_S5_N 90 154
No external refs found!