1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.016G076800

Potri.016G076800


Description : Ribosomal protein S4


Gene families : OG_42_0001595 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001595_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G076800
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
157263 No alias Ribosomal protein S4 0.04 Orthogroups_2024-Update
Bradi1g20580 No alias Ribosomal protein S4 0.03 Orthogroups_2024-Update
Bradi1g61090 No alias Ribosomal protein S4 0.02 Orthogroups_2024-Update
Bradi4g07120 No alias Ribosomal protein S4 0.06 Orthogroups_2024-Update
Bradi4g14160 No alias Ribosomal protein S4 0.03 Orthogroups_2024-Update
Brara.C00655.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.J01972.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
HORVU2Hr1G028510.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G038920.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Kfl00038_0240 kfl00038_0240_v1.1 (at5g39850 : 306.0) Ribosomal protein S4; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Pp1s13_410V6 No alias 40s ribosomal protein s9 0.03 Orthogroups_2024-Update
Pp1s223_95V6 No alias 40s ribosomal protein s9 0.03 Orthogroups_2024-Update
Seita.3G361100.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Seita.9G384200.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G384700.2 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.008G100000.1 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sopen01g006230 No alias Ribosomal protein S4/S9 N-terminal domain 0.04 Orthogroups_2024-Update
Sopen04g001730 No alias Ribosomal protein S4/S9 N-terminal domain 0.04 Orthogroups_2024-Update
evm.model.contig_2502.7 No alias (at5g15200 : 244.0) Ribosomal protein S4; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 109 152
IPR001912 Ribosomal_S4/S9_N 12 64
No external refs found!